supportsci:tools
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supportsci:tools [2019/04/08 11:57] – [EEE(2)] benito | supportsci:tools [2019/04/08 11:58] (current) – [EEE(2)] benito | ||
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**pipelet.py** - Parses the pipe letter (exp.pipelet) to be sent to the PI after pipelining the data. | **pipelet.py** - Parses the pipe letter (exp.pipelet) to be sent to the PI after pipelining the data. | ||
< | < | ||
- | usage: pipelet.py [-h] [-v] [-o OUTPUT] [-c CREDENTIALS] [-u USERNAME] [-p PASSWORD] experiment jss | + | usage: pipelet.py [-h] [-v] [-o OUTPUT] [-c CREDENTIALS] [-u USERNAME] [-p PASSWORD] |
+ | experiment jss | ||
- | Creates a .pipelet file in the current directory. This letter is the content that must be sent to the PI after pipelining an experiment. It contains information about the pipeline output and the credentials to access the data. | + | Creates a .pipelet file in the current directory. This letter is the content that must |
- | It takes the credentials from the username_password.auth file that should be placed in the current directory (otherwise specify its file, or the username and password as parameters). The user must provide the following information: | + | be sent to the PI after pipelining an experiment. It contains information about the |
+ | pipeline output and the credentials to access the data. | ||
+ | It takes the credentials from the username_password.auth file that should be placed in | ||
+ | the current directory (otherwise specify its file, or the username and password as parameters). | ||
+ | The user must provide the following information: | ||
- The experiment name (case insensitive). | - The experiment name (case insensitive). | ||
- Who are you (the Support Scientist). Type your surname. | - Who are you (the Support Scientist). Type your surname. | ||
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-v, --version | -v, --version | ||
-o OUTPUT, --output OUTPUT | -o OUTPUT, --output OUTPUT | ||
- | Output directory where the file {experiment}.pipelet will be store (by default the current directory) | + | Output directory where the file {experiment}.pipelet will be store |
+ | | ||
-c CREDENTIALS, | -c CREDENTIALS, | ||
- | Auth file containing the username and password in its name (required if *.auth is not in current directory). | + | Auth file containing the username and password in its name (required |
+ | | ||
-u USERNAME, --username USERNAME | -u USERNAME, --username USERNAME | ||
Username to access the data (required if no credential file exists) | Username to access the data (required if no credential file exists) |
supportsci/tools.1554724654.txt.gz · Last modified: 2019/04/08 11:57 by benito